Exercise: Performing Analysis with MDTraj Published 2014-05-09 Download video MP4 360p Download video MP4 720p Recommendations 27:51 Introduction to Molecular Dynamics Workflows and Tools 09:26 MDtraj Tutorials- (4)- RMSD analysis of protein MD trajectory 32:58 Introduction to Molecular Dynamics Trajectory Analysis and Markov State Models (MSM) 07:12 MDtraj Tutorials- (1) Introduction and Installation with Conda 37:59 Introduction to Molecular Dynamics 12:54 [OUTDATED] Desmond - Analyzing MD Trajectories with the Simulation Interactions Diagram (Part 4) 3:50:19 Data Analytics for Beginners | Data Analytics Training | Data Analytics Course | Intellipaat 31:24 Molecular Dynamics Trajectory Analysis using VMD 16:33 Talking Tech and AI with Tim Cook! 13:04 Introduction to Running Simulations with OpenMM 10:20 MDtraj Tutorials- (2) Load, slice, align,combine,and save MDs trajectories 29:48 The Future of Molecular Dynamics 14:27 What is Chrome? 03:31 RMSD analysis of trajectory (DCD file) using VMD 19:50 Customizing Forces and Integrators with OpenMM 34:40 Introduction to the OpenMM API 23:17 CC_news 013 Comparism of mdtraj, mdanalysis and pytraj EN 17:47 Using AMOEBA Polarizable Force Fields Similar videos 09:16 MDtraj Tutorials- (3) atom selection language 05:59 MDtraj Tutorials- (5)- RMSF analysis of protein MD trajectory 05:47 Setting up MD trajectories 00:51 WebGL-based Protein Visualization with the MDTraj + IPython Notebook 52:00 Lecture 2: Analysis of software performance II 25:55 CC_news 013 mdtraj, mdanalysis, pytraj比较(zh_CN) 19:26 Pairwise RMSD analysis of a trajectory by using MDanalysis (Python) 10:47 Analysis Linear Interaction Energy (LIE) and MMPBSA using CaFE and NAMD | MMGBSA dan LIE Pada NAMD 00:22 MD trajectory extraction by Isomap 13:16 Exercise: Heating and Constraining Particles to Simulate a Protein-Ligand System 04:56 Calculating RMSD for whole protein using text command 37:05 Install Anaconda, Python, Gromacs, Amber Tools, OpenMM, RDkit, MDAnalysis, pytraj, MDtraj, Rise 09:25 MDAnalysis tutorial: Extract/Save atomic information as data arrays from/to PDB files (B_factors) 02:19 NGL - Protein, DNA & RNA Visualization (WebGL / Javascript) 43:59 Exercise Analysis - Jan Machacek More results