Intermediate VMD topics - Trajectories, movies, scripting Published 2020-11-16 Download video MP4 360p Download video MP4 720p Recommendations 56:29 Molecular visualization with VMD 31:24 Molecular Dynamics Trajectory Analysis using VMD 1:43:28 Introduction to LAMMPS | Molecular Dynamics Made Easy 1:17:43 EP 10 | Protein-Ligand MD Simulation in Gromacs-A to Z | all reusable commands and files provided 10:00 Movie Making from molecular dynamics simulation with VMD 1:00:14 Emacs as a programming IDE for Python, R, and Julia 03:31 RMSD analysis of trajectory (DCD file) using VMD 1:42:51 Intro to Molecular Dynamics Simulation using LAMMPS 11:37 Create High Quality Videos in VMD 04:12 An Introduction to Molecular Dynamics 19:26 Pairwise RMSD analysis of a trajectory by using MDanalysis (Python) 05:59 Programming vs Coding - What's the difference? 1:01:57 C++20’s Coroutines for Beginners - Andreas Fertig - CppCon 2022 13:24 VMD Tutorial for Beginners 10:05 LAMMPS Tutorial #1: Getting Started for Absolute Beginners 07:13 Visualizing orbitals using VMD 53:28 Molecular Dynamics Siumlations with Gromacs 09:58 How to Create Simple Molecular Dynamics Simulations in Chimera 04:34 Write LAMMPS Data File with VMD Software Similar videos 06:19 VMD movie maker: a trajectory with time steps 05:18 How to make a HD movie in VMD 03:59 Load a part of the DCD file/trajectory in VMD 24:58 T3.4 Visualizing the trajectories with VMD 15:33 VMD data analysis automatization (part1): Load, wrap, align, and calculate RMSD of trajectory 18:24 Analysis of Molecular Dynamics Simulation Trajectory using VMD plugins without any codes 25:46 How to perform basic operations on a molecular structure using VMD? 33:28 Mariano Spivak - Advanced visualization, figures and movies in VMD 02:28 Joining 2 trajectory files in VMD for Molecular Dynamics Simulation 07:09 Loading a Trajectory in VMD 1:35:34 Mariano Spivak - Hands-on tutorial session: Creating images and movies with VMD and FFTK tutorial 00:21 vmd 01:45 ESC 774 - 02 - Basic .xyz Coordinates and Visualization by VMD 08:32 VMD Scripting : How to rotate a protein around specific axis and save a new rotated pdb file? 01:26 How to extract frames and make snapshots out of trajectories: MDS analysis 06:24 VMD Chapter 2 More results