De novo assembly of genome/ transcriptome. De novo sequencing. Challenges. Popular assemblers. NGS
Published 2022-12-17Download video
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51:10 Fundamentals of Genome Assembly
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03:48 What are reads, contigs and scaffold?
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04:49 De novo genome sequencing
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14:22 Transcriptomics 1: analyzing RNA-seq data by running bioinformatics pipelines
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14:37 Sanger DNA Sequencing, From Then to Now.
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02:43 Difference between sequencing Coverage and depth. Depth vs Coverage. Why they are important?
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25:05 Next Generation Sequencing 2: Illumina NGS Sample Preparation - Eric Chow (UCSF)
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02:44 Difference between De novo and reference-based genome assembly. Which one is more suitable.
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30:56 The Fundamentals of Genome Assembly
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04:09 EST, Unigene and Transcript. What is the difference between them. (Reads, Contigs, Scaffold)
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41:35 Learn about Illumina's Next-Generation Sequencing Workflow
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09:16 Microarray Technique || DNA Microarray || Gene expression analysis using microarray
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03:49 Whole genome sequencing: From sample to report
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09:38 Transcriptome analysis. Learn library preparation and data analysis from scratch.
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04:18 Genome annotation
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12:38 How to Use BLAST for Finding and Aligning DNA or Protein Sequences
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07:03 4) Next Generation Sequencing (NGS) - Data Analysis
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05:35 Data Overload! Making Sense of Genome Sequencing with Bioinformatics
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24:37 How to get started with data analysis
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09:29 Genome Assembly - Overview Part 1
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